Citation: | Xue-yang Yu, Si-yuan Ye, 2020. The universal applicability of logistic curve in simulating ecosystem carbon dynamic, China Geology, 3, 292-298. doi: 10.31035/cg2020029 |
As an S-shaped curve, the logistic curve has both high and low limit, which provides advantages in modelling the influences of environmental factors on biogeological processes. However, although the logistic curve and its transformations have drawn much attention in theoretical modelling, it is often used as a classification method to determine a true or false condition, and is less often applied in simulating the real data set. Starting from the basic theory of the logistic curve, with observed data sets, this paper explored the new application scenarios such as modelling the time series of environmental factors, modelling the influence of environmental factors on biogeological processes and modelling the theoretical curve in ecology area. By comparing the performance of traditional model and the logistic model, the results indicated that logistic modelling worked as well as traditional equations. Under certain conditions, such as modelling the influence of temperature on ecosystem respiration, the logistic model is more realistic than the widely applied Lloyd-Taylor formulation under extreme conditions. These cases confirmed that the logistic curve was capable of simulating nonlinear influences of multiple factors on biogeological processes such as carbon dynamic.
[1] | Austin PC, Merlo J. 2017. Intermediate and advanced topics in multilevel logistic regression analysis. Statistics in Medicine, 36(20), 3257–3277. doi: 10.1002/sim.7336 |
[2] | Bao XJ, Zheng SY, Mao SQ, Gu TL, Liu SK, Sun JH, Zhang LN. 2018. A potential risk factor of essential hypertension in case-control study: Circular RNA hsa_circ_0037911. Biochemical and Biophysical Research Communications, 498(4), 789–794. doi: 10.1016/j.bbrc.2018.03.059 |
[3] | Coleman BD. 1979. Nonautonomous logistic equations as models of the adjustment of populations to environmental change. Mathematical Biosciences, 45(3–4), 159–173. doi: 10.1016/0025-5564(79)90057-9 |
[4] | Compton BW, Rhymer JM, Mccollough M. 2002. Habitat Selection by Wood Turtles (Clemmys Insculpta): An Application of Paired Logistic Regression. Ecology, 83(3), 833–843. doi: 10.2307/3071885 |
[5] | Cui JB, Li CS, Trettin C. 2005. Analyzing the ecosystem carbon and hydrologic characteristics of forested wetland using a biogeochemical process model. Global Change Biology, 11(2), 278–289. doi: 10.1111/j.1365-2486.2005.00900.x |
[6] | Friedman JH, Hastie T, Tibshirani R. 2000. Additive logistic regression: A statistical view of boosting. Annals of Statistics, 28(2), 337–407. |
[7] | Leach D. 1981. Re-evaluation of the logistic curve for human populations. Journal of the Royal Statistical Society, 144(1), 94–103. doi: 10.2307/2982163 |
[8] | Li CS, Cui JB, Sun G, Trettin C. 2004. Modeling impacts of management on carbon sequestration and trace gas emissions in forested wetland ecosystems. Environmental Management, 33(1), S176–S186. |
[9] | Lloyd J, Taylor J. 1994. On the temperature dependence of soil respiration. Functional Ecology, 315–323. |
[10] | Meadows DH, Meadows DL, Randers J, BehrensⅢ WW. 1972. Club of Rome: The limits to growth; a report for the Club of Rome’s project on the predicament of mankind. New York, Universe Books. |
[11] | Pearce J, Ferrier S. 2000. Evaluating the predictive performance of habitat models developed using logistic regression. Ecological Modelling, 133(3), 225–245. doi: 10.1016/S0304-3800(00)00322-7 |
[12] | Peretto PF, Valente S. 2011. Resources, innovation and growth in the global economy. Journal of Monetary Economics, 58(4), 387–399. doi: 10.1016/j.jmoneco.2011.07.001 |
[13] | Pugh CA, Reed DE, Desai AR, Sulman BN. 2018. Wetland flux controls: How does interacting water table levels and temperature influence carbon dioxide and methane fluxes in northern Wisconsin? Biogeochemistry, 137(1–2), 15–25. doi: 10.1007/s10533-017-0414-x |
[14] | Rodeghiero M, Cescatti A. 2005. Main determinants of forest soil respiration along an elevation/temperature gradient in the Italian Alps. Global Change Biology, 11(7), 1024–1041. doi: 10.1111/j.1365-2486.2005.00963.x |
[15] | Slavov N, Budnik BA, Schwab DJ, Airoldi EM, Oudenaarden AV. 2014. Constant growth rate can be supported by decreasing energy flux and increasing aerobic glycolysis. Cell Reports, 7(3), 705–714. doi: 10.1016/j.celrep.2014.03.057 |
[16] | Smith FE. 1963. Population dynamics in daphnia magna and a new model for population growth. Ecology, 44(4), 651–663. |
[17] | Tillack A, Clasen A, Kleinschmit B, Förster M. 2014. Estimation of the seasonal leaf area index in an alluvial forest using high-resolution satellite-based vegetation indices. Remote Sensing of Environment, 141, 52–63. doi: 10.1016/j.rse.2013.10.018 |
[18] | Ye SY, Krauss KW, Brix H, Wei MJ, Olsson L, Yu XY, Ma XY, Wang J, Yuan HM, Zhao GM. 2016. Inter-annual variability of area-scaled gaseous carbon emissions from wetland soils in the Liaohe Delta, China. Plos One, 11(8), e0160612. doi: 10.1371/journal.pone.0160612 |
[19] | Yu XY, Ye SY, Olsson L, Wei MJ, Krauss KW, Brix H. 2019. A 3-year in-situ measurement of CO2 efflux in coastal wetlands: Understanding carbon loss through ecosystem respiration and its partitioning. Wetlands. https://doi.org/10.1007/s13157-019-01197-0 |
[20] | Yue TX, Jorgensen SE, Larocque GR. 2011. Progress in global ecological modelling. Ecological Modelling, 222(14), 2172–2177. doi: 10.1016/j.ecolmodel.2010.06.008 |
[21] | Zhang L, Sun R, Xu ZW, Qiao C, Jiang GQ. 2015. Diurnal and seasonal variations in carbon dioxide exchange in ecosystems in the Zhangye Oasis Area, Northwest China. Plos One, 10(6), e0130243. doi: 10.1371/journal.pone.0130243 |
[22] | Zhang Y, Li CS, Trettin CC, Li HB, Sun G. 2002. An integrated model of soil, hydrology, and vegetation for carbon dynamics in wetland ecosystems. Global Biogeochemical Cycles, 16(4), 1061. |
Basic shape and transformation of logistic curve. a–the basic form of logistic curve. The curve has both high and low limitation, with symmetric center of (x0, 0.5×L). Parameter k determined the steepness of the S-shaped curve and the product of k and the length of increasing interval (s) is approximately 13.8135. b–the basic form of logistic curve with a given parameter set (L=1, x0=0, k=1). c–curve transformation by adding a constant c to basic logistic curve with given parameter set (L=1, x0=0, k=1, c=−1). d–curve transformation by adding two basic logistic curves together with parameter sets (f1: L=1, x0=4, k=1) and (f2: L=−1, x0=10, k=1).
The application examples of logistic curve when simulating the variation of environmental variables. The black points represented the observed data and the blue curve indicated the simulated results. a–simulating seasonal variation of LAI using logistic curve. b–simulating diurnal variation of air temperature change with logistic curve. The performance of each fitting was described in Table 1.
The comparison of NEE fitting as well as ER fitting using logistic curve and traditional equations. a–modelling the correlations between PPFD and NEE using different modelling equations (the Michaelis-Menten equation and the Logistic form equation). b–modelling the correlations between soil temperature at 5 cm and ER using different modelling equations (the Lloyd-Taylor equation and the Logistic form equation).
The application of logistic curve in modelling the combination effect of plant basal diameter (D) and plant height (H) on fresh aboveground biomass (AGB).