2019 Vol. 46, No. 2
Article Contents

HE Ze, NING Zhuo, HUANG Guanxing, LIU Dandan, ZHANG Qianqian, SUN Jichao. 2019. The response characteristics of microbial diversity to shallow groundwater contamination in the piedmont of the Taihang Mountains using molecular biotechnologies: A case study of groundwater of Hutuo River Basin[J]. Geology in China, 46(2): 290-301. doi: 10.12029/gc20190206
Citation: HE Ze, NING Zhuo, HUANG Guanxing, LIU Dandan, ZHANG Qianqian, SUN Jichao. 2019. The response characteristics of microbial diversity to shallow groundwater contamination in the piedmont of the Taihang Mountains using molecular biotechnologies: A case study of groundwater of Hutuo River Basin[J]. Geology in China, 46(2): 290-301. doi: 10.12029/gc20190206

The response characteristics of microbial diversity to shallow groundwater contamination in the piedmont of the Taihang Mountains using molecular biotechnologies: A case study of groundwater of Hutuo River Basin

    Fund Project: Supported by China Geological Survey Program (No. DD20160309), National Science Foundation of China (No.41602261), Fundamental Research Funds for Central Public Welfare Research Institutes, CAGS (No. SK201702) and Natural Science Foundation of Hebei Province (No. D2016504021)
More Information
  • Author Bio: HE Ze, male, born in 1981, senior engineer, engages in research on natural attenuation and microbial investigation; E-mail: heze25@163.com
  • In the groundwater contamination research, molecular biotechnologies are one of the cutting-edge technologies. This kind of technologies have been commonly used at site scale, but rarely applied at regional scale. The shallow groundwater in Hutuo River Basin was selected as the study subject, because of it is one of the typical regions in front of the Taihang Mountains.67 samples were collected along the river. The 16s rDNA gene sequences were tested by high-throughput sequencing technology. According to the environmental factors of NO3-, COD and TDS, the microbial communities and the functional indicator microorganisms related to groundwater contamination were studied. The results showed that, using the cumulative probability distribution method, the samples were divided into three groups:background (B group), nitrate pollution (N group), and organic pollution (Y group).This grouping rule was close to the Ⅲ water grade threshold in the quality standard of groundwater. The order of microbial community richness is B group > N group > Y group. The organic pollution could decrease the richness diversity of microbial communities, and the difference was more significant in comparison with background microorganisms. The functional indicator microorganisms related to organic pollution was Acinetobacter, and the functional indicator microorganisms related to nitrate pollution was Nitrospira. The molecular biotechnologies and analysis methods used in this research could provide the theoretical evidence for regional environmental investigation and bioremediation.

  • 加载中
  • Abbai N S, Pillay B.2013.Analysis of hydrocarbon-contaminated groundwater metagenomes as revealed by high-throughput sequencing[J].Molecular Biotechnology, 54 (3):900-912.

    Google Scholar

    Bekins B A, Cozzarelli I M, Godsy E M, Warren E, Essaid H I, Tuccillo M E.2001.Progression of natural attenuation processes at a crude oil spill site:Ⅱ.Controls on spatial distribution of microbial populations[J].Journal of Contaminant Hydrology, 53(3):387-406.

    Google Scholar

    Bradley P M.2000.Microbial degradation of chloroethenes in groundwater systems[J].Hydrogeology Journal, 8 (1):104-111.

    Google Scholar

    Casci T.2010.Microbial biodiversity in groundwater ecosystems[J].Freshwater Biology, 54 (4):649-677.

    Google Scholar

    Chen B, Teh B S, Sun C, Hu S, Lu X, Boland W, Shao Y.2016.Biodiversity and Activity of the Gut Microbiota across the Life History of the Insect Herbivore Spodoptera littoralis[J].Scientific Reports, 6 29505. doi: 10.1038/srep29505

    CrossRef Google Scholar

    Chen Y, Li C, Zhou Z, Wen J, You X, Mao Y, Lu C, Huo G, Jia X.2014.Enhanced biodegradation of alkane hydrocarbons and crude oil by mixed strains and bacterial community analysis[J].Applied Biochemistry & Biotechnology, 172 (7):3433-3447.

    Google Scholar

    China Geolegical Survey.2015.Specification for Regional Groundwater Contamination Survey and Evaluation (DZ/T 0288-2015)[S] (in Chinese).

    Google Scholar

    Daims H, Lebedeva E V, Pjevac P, Han P, Herbold C, Albertsen M, Jehmlich N, Palatinszky M, Vierheilig J, Bulaev A.2015.Complete nitrification by Nitrospirabacteria[J].Nature, 528 (7583):504-509. doi: 10.1038/nature16461

    CrossRef Google Scholar

    Daims H, Nielsen J L, Nielsen P H, Schleifer K H, Wagner M.2001.In situ characterization of Nitrospira-like nitrite-oxidizing bacteria active in wastewater treatment plants[J].Applied & Environmental Microbiology, 67 (11):5273.

    Google Scholar

    Fei Yuhong, Zhang Zhaoji, Yang Mei, Li Yasong, Qian Yong, Meng Suhua, Chen Jingsheng.2010.Health risk assessment of groundwater organic pollution in the Hutuohe Plain[J].Shanghai Geology, (2):13-19(in Chinese with English abstract).

    Google Scholar

    Feng Y, Li X, Song T, Yu Y, Qi J.2017.Stimulation effect of electric current density (ECD) on microbial community of a three dimensional particle electrode coupled with biological aerated filter reactor (TDE-BAF)[J].Bioresource Technology, 243 (Supplement C):667-675.

    Google Scholar

    Fout G S, Cashdollar J L, Griffin S M, Brinkman N E, Varughese E A, Parshionikar S U.2016.EPA Method 1615.Measurement of enterovirus and norovirus occurrence in water by culture and RTqPCR.Part Ⅲ.Virus detection by RT-qPCR[J].Journal of Visualized Experiments:JoVE, (107):52646.

    Google Scholar

    Groffman P M, Howard G, Gold A J, Nelson W M.1996.Microbial nitrate processing in shallow groundwater in a riparian forest[J].Journal of Environmental Quality, 25 (6):1309-1316.

    Google Scholar

    Guo Haipeng, Bai Jinbin, Zhang Youquan, Wang Liya, Shi Jusong, Li Wenpeng.2017.The evolution characteristics and mechanism of the land subsidence in typical areas of the North China Plain[J].Geology in China, 44 (6):1115-1127(in Chinese with English abstract)

    Google Scholar

    Hassanshahian M, Emtiazi G, Cappello S.2012.Isolation and characterization of crude-oil-degrading bacteria from the Persian Gulf and the Caspian Sea[J].Marine Pollution Bulletin, 64 (1):7-12. doi: 10.1016/j.marpolbul.2011.11.006

    CrossRef Google Scholar

    Hendrickx B, Dejonghe W, Faber F, Boënne W, Bastiaens L, Verstraete W, Top E M, Springael D.2010.PCR-DGGE method to assess the diversity of BTEX mono-oxygenase genes at contaminated sites[J].Fems Microbiology Ecology, 55 (2):262-273.

    Google Scholar

    Hovanec T A, Taylor L T, Blakis A, Delong E F.1998.Nitrospira-like bacteria associated with nitrite oxidation in freshwater aquaria[J].Applied & Environmental Microbiology, 64 (1):258.

    Google Scholar

    Huang Xiaolan, Chen Jianyao, Xie Lichun, Fu Congsheng, Zhou Shining.2010.Spatial characteristics of microbial groups associated with the groundwater flow in a small watershed[J].Environmental Science, 31(10):2299-2304(in Chinese with English abstract).

    Google Scholar

    Ji P, Rhoads W J, Edwards M A, Pruden A.2017.Impact of water heater temperature setting and water use frequency on the building plumbing microbiome[J].Isme Journal, 11 (6):1318-1330. doi: 10.1038/ismej.2017.14

    CrossRef Google Scholar

    Jin S, Zhao D, Cai C, Song D, Shen J, Xu A, Qiao Y, Ran Z, Zheng Q.2017.Low-dose penicillin exposure in early life decreases Th17 and the susceptibility to DSS colitis in mice through gut microbiota modification[J].Scientific Reports, 7:43662. doi: 10.1038/srep43662

    CrossRef Google Scholar

    John D E, Rose J B.2005.Review of factors affecting microbial survival in groundwater[J].Environmental Science & Technology, 39 (19):7345-7356.

    Google Scholar

    Kao C M, Liao H Y, Chien C C, Tseng Y K, Tang P, Lin C E, Chen S C.2016.The change of microbial community from chlorinated solvent-contaminated groundwater after biostimulation using the metagenome analysis[J].Journal of hazardous materials, 302:144-150. doi: 10.1016/j.jhazmat.2015.09.047

    CrossRef Google Scholar

    Karczewski K, Riss H W, Meyer E I.2017.Comparison of DNAfingerprinting (T-RFLP) and high-throughput sequencing (HTS) to assess the diversity and composition of microbial communities in groundwater ecosystems[J].Limnologica-Ecology and Management of Inland Waters, 67:45-53. doi: 10.1016/j.limno.2017.10.001

    CrossRef Google Scholar

    Kate M S, Kristin A H.2005.Natural attenuation and enhanced bioremediation of organic contaminants in groundwater[J].Current Opinion in Biotechnology, 16 (3):246-253. doi: 10.1016/j.copbio.2005.03.009

    CrossRef Google Scholar

    Kimura H, Sugihara M, Yamamoto H, Patel B K, Kato K, Hanada S.2005.Microbial community in a geothermal aquifer associated with the subsurface of the Great Artesian Basin, Australia[J].Extremophiles, 9(5):407-414. doi: 10.1007/s00792-005-0454-3

    CrossRef Google Scholar

    Lautenschlager K, Hwang C, Liu W T, Boon N, Köster O, Vrouwenvelder H, Egli T, Hammes F.2013.A microbiology-based multi-parametric approach towards assessing biological stability in drinking water distribution networks[J].Water Research, 47 (9):3015-3025. doi: 10.1016/j.watres.2013.03.002

    CrossRef Google Scholar

    Leung M H Y, Chan K C K, Lee P K H.2016.Skin fungal community and its correlation with bacterial community of urban Chinese individuals[J].Microbiome, 4 (1):46. doi: 10.1186/s40168-016-0192-z

    CrossRef Google Scholar

    Li Yasong, Zhang Zhaoji, Fei Yuhong, Wang Zhao, Chen Jingsheng, Zhang Fenge, Qian Yong.2012.Preliminary study on organic pollution of shallow groundwater in the alluvial plain of Hutuo River[J].Journal of Arid Land Resources & Environment, 26 (8):52-56(in Chinese with English abstract).

    Google Scholar

    Ma Zhen, Xie hailan, Lin Liangjun, Hu Qiuyun, Qian Yong, Zhang Surong, Wang Guiling, Li Jianguo, Tan Chengxuan, Guo Haipeng, Zhang Fucun, Zhao Changrong, Liu Hongwei.2017.The environmental geological conditions of Land resources in the Beijing-Tianjin-Hebei region[J].Geology in China, ,44 (5):857-873(in Chinese with English abstract).

    Google Scholar

    Macler B A, Merkle J C.2000.Current knowledge on groundwater microbial pathogens and their control[J].Hydrogeology Journal, 8(1):29-40.

    Google Scholar

    Ning Zhuo, Guo Caijuan, Cai Pingping, Zhang Min, Chen Zongyu, He Ze.2018.Geochemical evaluation of biodegradation capacity in a petroleum contaminated aquifer[J].China Environmental Science, 38(11):4068-4074(in Chinese with English abstract).

    Google Scholar

    Ning Z, Zhang M, He Z, Cai P, Guo C, Wang P.2018.Spatial Pattern of Bacterial Community Diversity Formed in Different Groundwater Field Corresponding to Electron Donors and Acceptors Distributions at a Petroleum-Contaminated Site[J].Water, 10 (7):842. doi: 10.3390/w10070842

    CrossRef Google Scholar

    Pronk M, Goldscheider N, Zopfi J.2009.Microbial communities in karst groundwater and their potential use for biomonitoring[J].Hydrogeology Journal, 17 (1):37-48.

    Google Scholar

    Rogers M B, Firek B, Min S, Yeh A, Brower-Sinning R, Aveson V, Kohl B L, Fabio A, Carcillo J A, Morowitz M J.2016.Disruption of the microbiota across multiple body sites in critically ill children[J].Microbiome, 4 (1):66. doi: 10.1186/s40168-016-0211-0

    CrossRef Google Scholar

    Safonov A V, Babich T L, Sokolova D S, Grouzdev D S, Tourova T P, Poltaraus A B, Zakharova E V, Merkel A Y, Novikov A P, Nazina T N.2018.Microbial Community and in situ Bioremediation of Groundwater by Nitrate Removal in the Zone of a Radioactive Waste Surface Repository[J].Frontiers in microbiology, 9:1985. doi: 10.3389/fmicb.2018.01985

    CrossRef Google Scholar

    Shen L, Wu H, Gao Z, Xu L, Ji L.2016.Comparison of community structures of Candidatus Methylomirabilis oxyfera-like bacteria of NC10 phylum in different freshwater habitats[J].Scientific Reports, 6:25647. doi: 10.1038/srep25647

    CrossRef Google Scholar

    Shi Jiansheng, Wang Zhao, Zhang Zhaoji, Fei Yuhong, Zhang Fenge, Li Yasong, Chen Jingsheng, Qian Yong.2011.Preliminary analysis on the organic contamination of groundwater in the North China Plain[J].Ecology & Environmental Sciences, 20 (11):1695-1699(in Chinese with English abstract).

    Google Scholar

    Song C, Wang B, Tan J, Zhu L, Lou D, Cen X.2017.Comparative analysis of the gut microbiota of black bears in China using highthroughput sequencing[J].Molecular Genetics & Genomics, 292(2):407-414.

    Google Scholar

    Spor A, Violle C, Bru D, Bizouard F, Calderón K, Philippot L, Breuil M C, Barnard R L.2016.Effectiveness of ecological rescue for altered soil microbial communities and functions[J].Isme Journal, 11 (1):272-283.

    Google Scholar

    Watanabe K, Watanabe K, Kodama Y, Syutsubo K, Harayama S.2000.Molecular characterization of bacterial populations in petroleumcontaminated groundwater discharged from underground crude Oil storage cavities[J].Appl. Environ. Microbiol, 66 (11):4803-4809. doi: 10.1128/AEM.66.11.4803-4809.2000

    CrossRef Google Scholar

    Wen Dongguang, Lin Liangjun, Sun Jichao, He Jiangtao, Wang Suming, Rao Zhu, Qi Jixiang.2008.Approach to investigation and assessment of organic contaminants in regional groundwater[J].Geology in China, 35 (5):814-819(in Chinese with English abstract).

    Google Scholar

    Wright J, Kirchner V, Bernard W, Ulrich N, Mclimans C, Campa M F, Hazen T, Macbeth T, Marabello D, Mcdermott J.2017.Bacterial community dynamics in dichloromethane-contaminated groundwater undergoing natural attenuation[J].Frontiers in Microbiology, 8:2300. doi: 10.3389/fmicb.2017.02300

    CrossRef Google Scholar

    Xue J, Caton K, Sherchan S.2018.Comparison of next-generation droplet digital PCR with quantitative PCR for enumeration of Naegleria fowleri in environmental water and clinical samples[J].Letters in Applied Microbiology, 67 (4):322-328. doi: 10.1111/lam.2018.67.issue-4

    CrossRef Google Scholar

    Ye Hao, Liu Changli, Jiang Jianmei, Pei Lixin, Zhang Yun, Hou Hongbing, Dong Hua, Guo Jiao.2008.Risk assessments of groundwater pollution in the Shijiazhuang reach of the Hutuo River, China[J].Geological Bulletin of China, 27(7):1065-1070(in Chinese with English abstract).

    Google Scholar

    Ye J, Joseph S D, Ji M, Nielsen S, Mitchell D R G, Donne S, Horvat J, Wang J, Munroe P, Thomas T.2017.Chemolithotrophic processes in the bacterial communities on the surface of mineral-enriched biochars[J].Isme Journal, 11 (5):1087-1101. doi: 10.1038/ismej.2016.187

    CrossRef Google Scholar

    Yuan H, Yao J, Masakorala K, Wang F, Cai M, Yu C.2013.Isolation and characterization of a newly isolated pyrene-degrading Acinetobacter strain USTB-X[J].Environmental Science & Pollution Research International, 21 (4):2724.

    Google Scholar

    Zhang Qianqian, Wang Huiwei, Zhai Tianlun, Hua Mengjian.2017.Characteristics and source apportionment of groundwater nitrate contamination in the Hutuo River alluvial-pluvial fan regions[J].Hydrogeology & Engineering Geology, 44(6):110-117 (in Chinese with English abstract).

    Google Scholar

    Zhang Yun, Wang Xiuyan, Liu Changli, Zhang Ming.2007.Engineering technology of recharging groundwater in Shijiazhuang with water diverted from the Yangtze River[J].Geology in China, 34(1):160-165(in Chinese with English abstract).

    Google Scholar

    Zhang Zhaoji, Luo Guozhong, Wang Zhao, Liu Chunhua, Li Yasong, Jiang Xianqiao.2009.Studyon sustainable utilization of groundwater in North China Plain[J].Resources Science, 31(3):355-360(in Chinese with English abstract).

    Google Scholar

    Zhang Zhaoji, Fei Yuhong, Guo Chunyan, Qian Yong.2012.Regional groundwater contaminati on assessment in the North China Plain[J].Journal of Jilin University, 42 (5):1456-1461.

    Google Scholar

    Zheng Z, Zhang Y, Su X, Cui X.2016.Responses of hydrochemical parameters, community structures, and microbial activities to the natural biodegradation of petroleum hydrocarbons in a groundwater-soil environment[J].Environmental Earth Sciences, 75 (21):1400. doi: 10.1007/s12665-016-6193-1

    CrossRef Google Scholar

    Zhou J, Xia B, Treves D S, Wu L Y, Marsh T L, O'neill R V, Palumbo A V, Tiedje J M.2002.Spatial and resource factors influencing high microbial diversity in soil[J].Appl. Environ. Microbiol., 68(1):326-334.

    Google Scholar

    费宇红, 张兆吉, 杨梅, 李亚松, 钱永, 孟素花, 陈京生.2010.滹沱河平原地下水有机污染健康风险评价[J].上海国土资源, (2):13-19. doi: 10.3969/j.issn.2095-1329.2010.02.003

    CrossRef Google Scholar

    郭海朋, 白晋斌, 张有全, 王丽亚, 石菊松, 李文鹏, 张作辰, 王云龙, 朱菊艳, 王海刚.2017.华北平原典型地段地面沉降演化特征与机理研究[J].中国地质, 44 (6):1115-1127.

    Google Scholar

    黄小兰, 陈建耀, 谢丽纯, 付丛生, 周世宁.2010.小流域地下水流微生物空间差异分析[J].环境科学, 31 (10):2299-2304.

    Google Scholar

    李亚松, 张兆吉, 费宇红, 王昭, 陈京生, 张凤娥, 钱永.2012.滹沱河冲积平原浅层地下水有机污染研究[J].干旱区资源与环境, 26(8):52-56.

    Google Scholar

    马震, 谢海澜, 林良俊, 胡秋韵, 钱永, 张素荣, 王贵玲, 李建国, 谭成轩, 郭海朋, 张福存, 赵长荣, 刘宏伟.2017.京津冀地区国土资源环境地质条件分析[J].中国地质, 44 (5):857-873.

    Google Scholar

    宁卓, 郭彩娟, 蔡萍萍, 张敏, 陈宗宇, 何泽.2018.某石油污染含水层降解能力地球化学评估[J].中国环境科学, 38 (11):4068-4074. doi: 10.3969/j.issn.1000-6923.2018.11.010

    CrossRef Google Scholar

    石建省, 王昭, 张兆吉, 费宇红, 张凤娥, 李亚松, 陈京生, 钱永.2011.华北平原地下水有机污染特征初步分析[J].生态环境学报, 20(11):1695-1699. doi: 10.3969/j.issn.1674-5906.2011.11.019

    CrossRef Google Scholar

    文冬光, 林良俊, 孙继朝, 何江涛, 王苏明, 饶竹, 齐继祥.2008.区域性地下水有机污染调查与评价方法[J].中国地质, 35 (5):814-819. doi: 10.3969/j.issn.1000-3657.2008.05.003

    CrossRef Google Scholar

    叶浩, 刘长礼, 姜建梅, 裴丽欣, 张云, 侯宏冰, 董华, 郭娇.2008.滹沱河石家庄段地下水污染风险评价[J].地质通报, 27 (7):1065-1070. doi: 10.3969/j.issn.1671-2552.2008.07.019

    CrossRef Google Scholar

    张千千, 王慧玮, 翟天伦, 花勐健.2017.滹沱河冲洪积扇地下水硝酸盐的污染特征及污染源解析[J].水文地质工程地质, 44 (6):110-117.

    Google Scholar

    张云, 王秀艳, 刘长礼, 张明.2007.利用北调江水补充调蓄石家庄地下水的工程技术方法探讨[J].中国地质, 34(1):160-165. doi: 10.3969/j.issn.1000-3657.2007.01.023

    CrossRef Google Scholar

    张兆吉, 费宇红, 郭春艳, 钱永, 李亚松.2012.华北平原区域地下水污染评价[J].吉林大学学报(地球科学版), 2012 (5):1456-1461.

    Google Scholar

    张兆吉, 雒国中, 王昭, 刘春华, 李亚松, 姜先桥.2009.华北平原地下水资源可持续利用研究[J].资源科学, 31 (3):355-360. doi: 10.3321/j.issn:1007-7588.2009.03.001

    CrossRef Google Scholar

    中国地质调查局.2015.区域地下水污染调查评价规范(DZ/T 0288-2015)[S].

    Google Scholar

  • 加载中
通讯作者: 陈斌, bchen63@163.com
  • 1. 

    沈阳化工大学材料科学与工程学院 沈阳 110142

  1. 本站搜索
  2. 百度学术搜索
  3. 万方数据库搜索
  4. CNKI搜索

Figures(9)

Tables(1)

Article Metrics

Article views(3073) PDF downloads(853) Cited by(0)

Access History

Catalog

    /

    DownLoad:  Full-Size Img  PowerPoint